Plant Lipid Signaling Protocols /
Munnik, Teun,
Plant Lipid Signaling Protocols / Teun Munnik & Ingo Heilmann. - New York : Humana Press, 2013. - xi, 305 p. : ill. ; 27 cm. - Methods in molecular biology (Clifton, N.J.), V-1009. . - Methods in molecular biology, 1009 1064-3745 ; Springer protocols, 1949-2448 . - Methods in molecular biology (Clifton, N.J.) ; v. 1009. Springer protocols (Series) .
Electronic books
Laboratory manuals
Includes bibliographical references and index.
PART :1 Analyzing plant signaling phospholipids through 32Pi-labeling and TLC / PART :2 Analysis of D3-,4-,5-phosphorylated phosphoinositides using HPLC / PART :3 Mass measurement of polyphosphoinositides by thin-layer and gas chromatography / PART :4 Measurement of inositol (1,4,5) trisphosphate in plant tissues by a competitive receptor binding assay / PART :5 Quantification of diacylglycerol by mass spectrometry / PART :6 Distinguishing phosphatidic acid pools from de novo synthesis, PLD, and DGK / PART :7 Use of phospholipase A2 for the production of lysophospholipids / PART :8 Analysis and quantification of plant membrane lipids by thin-layer chromatography and gas chromatography / PART :9 Lipidomic analysis of plant membrane lipids by direct infusion tandem mass spectrometry / PART :10 Detection and quantification of plant sphingolipids by LC-MS / PART :11 Analysis of defense signals in Arabidopsis thaliana leaves by ultra-performance liquid chromatography/tandem mass
Spectrometry : jasmonates, salicylic acid, abscisic acid / PART :12 Analysis of fatty acid amide hydrolase activity in plants / PART :13 Ionization behavior of polyphosphoinositides determined via the preparation of pH titration curves using solid-state 31P
NMR / PART :14 Phosphatidylinositol synthase activity from plant membrane fractions and from E. coli- expressed recombinant peptides / PART :15 Phosphatidylinositol 4-kinase and phosphatidylinositol 4-phosphate 5-kinase assays / PART :16 Assaying inositol and phosphoinositide phosphatase enzymes / PART :17 Determination of phospholipase C activity in vitro / PART :18 Assaying nonspecific phospholipase C activity / PART :19 Assaying different types of plant phospholipase D activities in vitro / PART :20 Measuring PLD activity in vivo / PART :21 Assaying plant phosphatidic acid phosphatase activity / PART :22 Assay of phospholipase A activity / PART :23 Lipid-binding analysis using a fat blot assay / PART :24 Liposome-binding assays to assess specificity and affinity of phospholipid-protein interactions / PART :25 Lipid affinity beads : from identifying new lipid binding proteins to assessing their binding properties / PART :26 Using genetically encoded fluorescent reporters to image lipid signalling in living plants / PART :27 Imaging changes in cytoplasmic calcium using the yellow cameleon 3.6 biosensor and confocal microscopy / Teun Munnik and Xavier Zarza -- Teun Munnik -- Mareike Heilmann and Ingo Heilmann -- Ingo Heilmann and Imara Y. Perera -- Katharina vom Dorp, Isabel Dombrink, and Peter Dörmann -- Steven A. Arisz and Teun Munnik -- Steven A. Arisz and Teun Munnik -- Vera Wewer, Peter Dörmann, and Georg Hölzl -- Sunitha Shiva ... [et al.] -- Jonathan E. Markham -- Nadja Stingl ... [et al.] -- Sang-Chul Kim, Lionel Faure, and Kent D. Chapman -- Zachary T. Graber and Edgar E. Kooijman -- Sylvie Collin and Françoise Cochet -- Yang Ju Im ... [et al.] -- Janet L. Donahue, Mustafa Ercetin, and Glenda E. Gillaspy -- S.M. Teresa Hernández-Sotomayor and J. Armando Muñoz-Sanchez -- P řemysl Pejchar, Günther F.E. Scherer, and Jan Martinec -- Kirk L. Pappan and Xuemin Wang -- Teun Munnik and Ana M. Laxalt -- Yuki Nakamura -- Michael Heinze and Werner Roos -- Teun Munnik and Magdalena Wierzchowiecka -- Magdalena M. Julkowska, Johanna M. Rankenberg, and Christa Testerink -- Fionn McLoughlin and Christa Testerink -- Joop E.M. Vermeer and Teun Munnik -- Sarah J. Swanson and Simon Gilroy.
As scientist begin to understand the complexity of lipid signaling and its roles in plant biology, there is an increasing interest in their analysis. Due to the low abundancy and transient nature of some of these hydrophobic compounds, this is not always easy. In Plant Lipid Signaling Protocols, expert researchers in the field detail experimental approaches by which plant signaling lipids can be studied. These methods and techniques include analysis of plant signaling lipids, including detailed protocols to detect various relevant compounds by targeted or non-targeted approaches; to assay relevant enzyme activities in biological material or using recombinant enzymes; to test for specific binding of signaling lipids to protein partners; or to visualize signaling lipids or lipid-derived signals in living plant cells. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Plant Lipid Signaling Protocols aids plant researchers in the continuing to study the roles of lipid signals
9781627034005 1627034005
Plant cellular signal transduction
Plant lipids
Lipids
Lipid Metabolism
Plants
Plant cellular signal transduction.
Plant lipids.--Laboratory manuals.--Laboratory manuals.--biosynthesis--Laboratory Manuals.--Laboratory Manuals.--chemistry--Laboratory Manuals.
Life sciences. Botany. Plant Sciences.
Handbooks, manuals, etc.
571.74 / MUN
Plant Lipid Signaling Protocols / Teun Munnik & Ingo Heilmann. - New York : Humana Press, 2013. - xi, 305 p. : ill. ; 27 cm. - Methods in molecular biology (Clifton, N.J.), V-1009. . - Methods in molecular biology, 1009 1064-3745 ; Springer protocols, 1949-2448 . - Methods in molecular biology (Clifton, N.J.) ; v. 1009. Springer protocols (Series) .
Electronic books
Laboratory manuals
Includes bibliographical references and index.
PART :1 Analyzing plant signaling phospholipids through 32Pi-labeling and TLC / PART :2 Analysis of D3-,4-,5-phosphorylated phosphoinositides using HPLC / PART :3 Mass measurement of polyphosphoinositides by thin-layer and gas chromatography / PART :4 Measurement of inositol (1,4,5) trisphosphate in plant tissues by a competitive receptor binding assay / PART :5 Quantification of diacylglycerol by mass spectrometry / PART :6 Distinguishing phosphatidic acid pools from de novo synthesis, PLD, and DGK / PART :7 Use of phospholipase A2 for the production of lysophospholipids / PART :8 Analysis and quantification of plant membrane lipids by thin-layer chromatography and gas chromatography / PART :9 Lipidomic analysis of plant membrane lipids by direct infusion tandem mass spectrometry / PART :10 Detection and quantification of plant sphingolipids by LC-MS / PART :11 Analysis of defense signals in Arabidopsis thaliana leaves by ultra-performance liquid chromatography/tandem mass
Spectrometry : jasmonates, salicylic acid, abscisic acid / PART :12 Analysis of fatty acid amide hydrolase activity in plants / PART :13 Ionization behavior of polyphosphoinositides determined via the preparation of pH titration curves using solid-state 31P
NMR / PART :14 Phosphatidylinositol synthase activity from plant membrane fractions and from E. coli- expressed recombinant peptides / PART :15 Phosphatidylinositol 4-kinase and phosphatidylinositol 4-phosphate 5-kinase assays / PART :16 Assaying inositol and phosphoinositide phosphatase enzymes / PART :17 Determination of phospholipase C activity in vitro / PART :18 Assaying nonspecific phospholipase C activity / PART :19 Assaying different types of plant phospholipase D activities in vitro / PART :20 Measuring PLD activity in vivo / PART :21 Assaying plant phosphatidic acid phosphatase activity / PART :22 Assay of phospholipase A activity / PART :23 Lipid-binding analysis using a fat blot assay / PART :24 Liposome-binding assays to assess specificity and affinity of phospholipid-protein interactions / PART :25 Lipid affinity beads : from identifying new lipid binding proteins to assessing their binding properties / PART :26 Using genetically encoded fluorescent reporters to image lipid signalling in living plants / PART :27 Imaging changes in cytoplasmic calcium using the yellow cameleon 3.6 biosensor and confocal microscopy / Teun Munnik and Xavier Zarza -- Teun Munnik -- Mareike Heilmann and Ingo Heilmann -- Ingo Heilmann and Imara Y. Perera -- Katharina vom Dorp, Isabel Dombrink, and Peter Dörmann -- Steven A. Arisz and Teun Munnik -- Steven A. Arisz and Teun Munnik -- Vera Wewer, Peter Dörmann, and Georg Hölzl -- Sunitha Shiva ... [et al.] -- Jonathan E. Markham -- Nadja Stingl ... [et al.] -- Sang-Chul Kim, Lionel Faure, and Kent D. Chapman -- Zachary T. Graber and Edgar E. Kooijman -- Sylvie Collin and Françoise Cochet -- Yang Ju Im ... [et al.] -- Janet L. Donahue, Mustafa Ercetin, and Glenda E. Gillaspy -- S.M. Teresa Hernández-Sotomayor and J. Armando Muñoz-Sanchez -- P řemysl Pejchar, Günther F.E. Scherer, and Jan Martinec -- Kirk L. Pappan and Xuemin Wang -- Teun Munnik and Ana M. Laxalt -- Yuki Nakamura -- Michael Heinze and Werner Roos -- Teun Munnik and Magdalena Wierzchowiecka -- Magdalena M. Julkowska, Johanna M. Rankenberg, and Christa Testerink -- Fionn McLoughlin and Christa Testerink -- Joop E.M. Vermeer and Teun Munnik -- Sarah J. Swanson and Simon Gilroy.
As scientist begin to understand the complexity of lipid signaling and its roles in plant biology, there is an increasing interest in their analysis. Due to the low abundancy and transient nature of some of these hydrophobic compounds, this is not always easy. In Plant Lipid Signaling Protocols, expert researchers in the field detail experimental approaches by which plant signaling lipids can be studied. These methods and techniques include analysis of plant signaling lipids, including detailed protocols to detect various relevant compounds by targeted or non-targeted approaches; to assay relevant enzyme activities in biological material or using recombinant enzymes; to test for specific binding of signaling lipids to protein partners; or to visualize signaling lipids or lipid-derived signals in living plant cells. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and key tips on troubleshooting and avoiding known pitfalls. Authoritative and practical, Plant Lipid Signaling Protocols aids plant researchers in the continuing to study the roles of lipid signals
9781627034005 1627034005
Plant cellular signal transduction
Plant lipids
Lipids
Lipid Metabolism
Plants
Plant cellular signal transduction.
Plant lipids.--Laboratory manuals.--Laboratory manuals.--biosynthesis--Laboratory Manuals.--Laboratory Manuals.--chemistry--Laboratory Manuals.
Life sciences. Botany. Plant Sciences.
Handbooks, manuals, etc.
571.74 / MUN